BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB017B03SP1|AL427114
(984 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig971 1915 0.0
>3x_Contig971
Length = 3245
Score = 1915 bits (964), Expect = 0.0
Identities = 973/978 (99%)
Strand = Plus / Plus
Query: 7 tgaaaagagcttctttgaaacaagtttgtaaccatcaatggatgcaaagagggtttgatt 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 827 tgaaaagagcttctttgaaacaagtttgtaaccatcaatggatgcaaagagggtttgatt 886
Query: 67 tcccacccccttcgtatattccacatagagttcctttaacagttgaaatgcttgatgtta 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 887 tcccacccccttcgtatattccacatagagttcctttaacagttgaaatgcttgatgtta 946
Query: 127 acgtaatcaaagaaatgcatcgtctagagttggttaatgatgttaacgatgctttacagg 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 947 acgtaatcaaagaaatgcatcgtctagagttggttaatgatgttaacgatgctttacagg 1006
Query: 187 ctctgcgtgacattattgactcacatgaatataaagaactgtcaagagaatattggtata 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1007 ctctgcgtgacattattgactcacatgaatataaagaactgtcaagagaatattggtata 1066
Query: 247 acgtccaaaattccaataaccaggaagatggaaccagagcattccatcctttgctttcta 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1067 acgtccaaaattccaataaccaggaagatggaaccagagcattccatcctttgctttcta 1126
Query: 307 tttattatctagtcgacgaaatgctaaagaggaagctggccaaaagactacagaaacaac 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1127 tttattatctagtcgacgaaatgctaaagaggaagctggccaaaagactacagaaacaac 1186
Query: 367 aacagctacaacaacagcaacagcaacaattacaggctggttatcaatccaaaccatttc 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1187 aacagctacaacaacagcaacagcaacaattacaggctggttatcaatccaaaccatttc 1246
Query: 427 aaggtcaatcgcagcccatatttccatctgaccaagtggacacttcaataccattacctg 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1247 aaggtcaatcgcagcccatatttccatctgaccaagtggacacttcaataccattacctg 1306
Query: 487 atcaatcgcagccaaaaactctacaacaacctgtgtctgttaacaatagtgattatattg 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1307 atcaatcgcagccaaaaactctacaacaacctgtgtctgttaacaatagtgattatattg 1366
Query: 547 ttcgaccatcaagtatcaaggaagtatctccagaacataccacttctccggcagcgtaca 606
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1367 ttcgaccatcaagtatcaaggaagtatctccagaacataccacttctccggcagcgtaca 1426
Query: 607 ttccatccaatttagaaagarattcgacagttgttgcctcaccagttaggaacaaagagc 666
|||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||
Sbjct: 1427 ttccatccaatttagaaagaaattcgacagtagttgcctcaccagttaggaacaaagagc 1486
Query: 667 taccacagattatgatccctccaaaacttgccattccagagctagcgcatacttctccta 726
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1487 taccacagattatgatccctccaaaacttgccattccagagctagcgcatacttctccta 1546
Query: 727 ctcgaaaatcaagcgatgcaaaccccgaactggacgcakaaatgtcaccatcgcctgccc 786
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1547 ctcgaaaatcaagcgatgcaaaccccgaactggacgcagtaatgtcaccatcgcctgccc 1606
Query: 787 caatggattatccatcccaacaagagcaaaccaaacaacaacaggctaacaagtacaaca 846
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1607 caatggattatccatcccaacaagagcaaaccaaacaacaacaggctaacaagtacaaca 1666
Query: 847 tgggctcggtaaaaacaagcactacaagcagtgagaagccaaagataggttctattttcc 906
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1667 tgggctcggtaaaaacaagcactacaagcagtgagaagccaaagataggttctattttcc 1726
Query: 907 gtagactttcacagcgccatcgccatgctcagaccataaaccagggctcgttacaagtgc 966
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1727 gtagactttcacagcgccatcgccatgctcagaccataaaccagggctcgttacaagtgc 1786
Query: 967 aggrgccgaaatcagtgg 984
||| ||||||||||||||
Sbjct: 1787 aggagccgaaatcagtgg 1804
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7240
Number of Sequences: 1807
Number of extensions: 7240
Number of successful extensions: 214
Number of sequences better than 1.0e-20: 1
length of query: 984
length of database: 10,358,551
effective HSP length: 16
effective length of query: 968
effective length of database: 10,329,639
effective search space: 9999090552
effective search space used: 9999090552
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)